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Decoding and reconstructing disease relations between dry eye and depression: a multimodal investigation comprising meta-analysis, genetic pathways and Mendelian randomization
Journal of Advanced Research ( IF 10.7 ) Pub Date : 2024-03-27 , DOI: 10.1016/j.jare.2024.03.015
Kao-Jung Chang , Hsin-Yu Wu , Pin-Hsuan Chiang , Yu-Tien Hsu , Pei-Yu Weng , Ting-Han Yu , Cheng-Yi Li , Yu-Hsiang Chen , He-Jhen Dai , Han-Ying Tsai , Yu-Jung Chang , You-Ren Wu , Yi-Ping Yang , Cheng-Ta Li , Chih-Chien Hsu , Shih-Jen Chen , Yu-Chun Chen , Ching-Yu Cheng , Ai-Ru Hsieh , Shih-Hwa Chiou

The clinical presentations of dry eye disease (DED) and depression (DEP) often comanifest. However, the robustness and the mechanisms underlying this association were undetermined. To this end, we set up a three-segment study that employed multimodality results (-analysis, genome-wide association study [GWAS] and Mendelian randomization [MR]) to elucidate the association, common pathways and causality between DED and DEP. A -analysis comprising 26 case−control studies was first conducted to confirm the DED-DEP association. Next, we performed a linkage disequilibrium (LD)-adjusted GWAS and targeted phenotype association study (PheWAS) in East Asian TW Biobank (TWB) and European UK Biobank (UKB) populations. Single-nucleotide polymorphisms (SNPs) were further screened for molecular interactions and common pathways at the functional gene level. To further elucidate the activated pathways in DED and DEP, a systemic transcriptome review was conducted on RNA sequencing samples from the Gene Expression Omnibus. Finally, 48 MR experiments were implemented to examine the bidirectional causation between DED and DEP. Our -analysis showed that DED patients are associated with an increased DEP prevalence (OR = 1.83), while DEP patients have a concurrent higher risk of DED (OR = 2.34). Notably, cross-disease GWAS analysis revealed that similar genetic architecture (r = 0.19) and pleiotropic functional genes contributed to phenotypes in both diseases. Through protein−protein interaction and ontology convergence, we summarized the pleiotropic functional genes under the ontology of immune activation, which was further validated by a transcriptome systemic review. Importantly, the inverse variance-weighted (IVW)-MR experiments in both TWB and UKB populations ( value <0.001) supported the bidirectional exposure-outcome causation for DED-to-DEP and DEP-to-DED. Despite stringent LD-corrected instrumental variable re-selection, the bidirectional causation between DED and DEP remained. With the multi-modal evidence combined, we consolidated the association and causation between DED and DEP.

中文翻译:

解码和重建干眼与抑郁症之间的疾病关系:一项包括荟萃分析、遗传途径和孟德尔随机化的多模式研究

干眼病(DED)和抑郁症(DEP)的临床表现常常同时出现。然而,这种关联的稳健性和潜在机制尚未确定。为此,我们建立了一项三段研究,采用多模态结果(分析、全基因组关联研究 [GWAS] 和孟德尔随机化 [MR])来阐明 DED 和 DEP 之间的关联、共同途径和因果关系。首先进行了一项包含 26 项病例对照研究的分析,以确认 DED-DEP 关联。接下来,我们在东亚 TW 生物库 (TWB) 和欧洲英国生物库 (UKB) 人群中进行了连锁不平衡 (LD) 调整的 GWAS 和靶向表型关联研究 (PheWAS)。在功能基因水平上进一步筛选单核苷酸多态性(SNP)的分子相互作用和共同途径。为了进一步阐明 DED 和 DEP 中的激活途径,对基因表达综合库的 RNA 测序样本进行了系统转录组审查。最后,进行了 48 个 MR 实验来检查 DED 和 DEP 之间的双向因果关系。我们的分析表明,DED 患者与 DEP 患病率增加相关(OR = 1.83),而 DEP 患者同时存在较高的 DED 风险(OR = 2.34)。值得注意的是,跨疾病 GWAS 分析表明,相似的遗传结构 (r = 0.19) 和多效性功能基因促成了两种疾病的表型。通过蛋白质-蛋白质相互作用和本体融合,我们总结了免疫激活本体下的多效性功能基因,并通过转录组系统综述进一步验证。重要的是,TWB 和 UKB 人群中的逆方差加权 (IVW)-MR 实验(值 <0.001)支持 DED 到 DEP 和 DEP 到 DED 的双向暴露结果因果关系。尽管进行了严格的 LD 校正工具变量重新选择,DED 和 DEP 之间的双向因果关系仍然存在。结合多模态证据,我们巩固了 DED 和 DEP 之间的关联和因果关系。
更新日期:2024-03-27
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