Intron lariat spliceosomes convert lariats to true circles: implications for intron transposition

  1. John P. Donohue1
  1. 1Center for Molecular Biology of RNA, University of California, Santa Cruz, Santa Cruz, California 95064, USA;
  2. 2Genomics Institute, University of California, Santa Cruz, Santa Cruz, California 95064, USA
  1. Corresponding author: ares{at}ucsc.edu

Abstract

Rare, full-length circular intron RNAs distinct from lariats have been reported in several species, but their biogenesis is not understood. We envisioned and tested a hypothesis for their formation using Saccharomyces cerevisiae, documenting full-length and novel processed circular RNAs from multiple introns. Evidence implicates a previously undescribed catalytic activity of the intron lariat spliceosome (ILS) in which the 3′-OH of the lariat tail (with optional trimming and adenylation by the nuclear 3′ processing machinery) attacks the branch, joining the intron 3′ end to the 5′ splice site in a 3′–5′ linked circle. Human U2 and U12 spliceosomes produce analogous full-length and processed circles. Postsplicing catalytic activity of the spliceosome may promote intron transposition during eukaryotic genome evolution.

Keywords

Footnotes

  • Received March 30, 2024.
  • Accepted April 24, 2024.

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see http://genesdev.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

| Table of Contents

Life Science Alliance